Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794210.1_cds_XP_016437549.1_3247
CDS Infomation

[gene=LOC107763574] [db_xref=GeneID:107763574] [protein=30S ribosomal protein S1-like] [protein_id=XP_016437549.1] [location=join(9139..10032,11064..11138,11220..11291,11785..11865,12088..12185,13292..13417,14060..14108,14261..14431)] [gbkey=CDS]
Sequence

ATGATGCCAATTCTTCTTCTTCCATGTAAGTCTTTCTCTATTCTCAATCCAATTCTGCCC
CTCAACACTTCTGTTATTTACAACACTGCCACCAAATTCTCAATTTTTTCCACTCCCCCA
AAATACCCACTTGTTAAAACCCCAAAATTTTCCAAGAATTTCTCTTCCCATTGGAATTCT
CAAATAAGTTTACATACCCATGTCTCTTTTTGCACTAAAAATGAAATCTTGGAAGAATTT
AGTACTACCCAGTTGGCTAAAGTGCCTGAAAGTGAAGAGTCTGAAGAGCTAGAATTACTT
AATAAGCCATATTTAAAGCAAATAAATAATGGGGTTGGTACTGAAATAGAAGAGGAGCCT
AAAAAAGTTAGTAAAGATGAAGTCTTGGAGCCTTTTTACAAGCTATTTAAGCCTAGGGAG
GAGTCATTGGGACAAGAAAGTAGTGATATAGAAGATACAGAACAGGAGGAGGAAAAAGTT
CATTCAGTTGAAGAAGAAAGTAAGAAGATTAGTGTAGAGTATTACGAACCGAAACCGGGT
GATTTGGTAGTAGGTGTTGTGGTTTCAGGCAATGAGTATAAACTTGATGTGAATGTTGGT
GCTGACCTTTTGGGTACCATGTTAACTAAGGATGTTTTGCCTTTGTATGACAAAGAGATG
GGATATTTGTTGTGTGATTTGGAGAAGGATGCTGAGGAATTCTTGGTAAGAGGGAAAATG
GGAATTGTGAGTTATGATGAGGCAGTAGAGAGTAGGGAATCAATGTCAGGGAAGCCTGTT
GTGGAGCCTGGGACTGTTCTTTTTTCTGAGGTTCTCGGAAGAACTCTCAGTGGTCGGCCG
TTACTGTCGACGAGAAGGCTCTTTAGACGCATTGCTTGGCATCGAGTGAGGCAGATTAAA
CAACTAAATGAACCTATTGAGGTGAAGATAACGGAGTGGAACACTGGCGGTCTTCTTACC
AGAATAGAGGGCTTACGGGCTTTTCTTCCAAAGGCTGATTTAATGAACAGAGTTAATAGT
TATACCGAGCTGAAGGAGAATGTGGGGCGTCGAATTAATGTGCTTATTACCAGAATAAAC
GAAGAAACTAATGACTTAATACTTAGTGAGAAGGAAGCTTGGCAAATGTTAAATCTGCAA
GAGGGGGTCCTTGTGGAAGGAACAGTGAAAAAGCTTTTTCCCTTTGGCGCACAGATAAGG
ATTGGTGAAACAAACCGAAGTGGCTTGCTACACATCTCAAATGTTACCCGAGGCGAGATT
ACTTCTATCAATAACTTGTTAGCTGTTGATGAGAAGGTGAAAGTTATGGTCGTGAAGTCA
ATGTTTCCTGACAAAATATCTCTCAGTATTGCAGAACTTGAAAGCGAGCCAGGATTATTT
TTAAAGGACAAGGAGAAAGTATTCTCTGAAGCAAAAGAGATGGCGAAGAAGTACAGACAG
AACCTACGAACTGTTTCAGCAACAAGGAAACCAGAACCCCTTCCAACCGATAGGCTACCT
TTCGAAGATGAAGAAAGTCTGTATGCTAATTGGAAATGGTTCGAGTTTGAGAGGGATATT
GTATAA

Peptide Sequence

PEP ID

XP_016437549.1
PEP Infomation

PREDICTED: 30S ribosomal protein S1-like [Nicotiana tabacum]
Sequence

MMPILLLPCKSFSILNPILPLNTSVIYNTATKFSIFSTPPKYPLVKTPKFSKNFSSHWNS
QISLHTHVSFCTKNEILEEFSTTQLAKVPESEESEELELLNKPYLKQINNGVGTEIEEEP
KKVSKDEVLEPFYKLFKPREESLGQESSDIEDTEQEEEKVHSVEEESKKISVEYYEPKPG
DLVVGVVVSGNEYKLDVNVGADLLGTMLTKDVLPLYDKEMGYLLCDLEKDAEEFLVRGKM
GIVSYDEAVESRESMSGKPVVEPGTVLFSEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIK
QLNEPIEVKITEWNTGGLLTRIEGLRAFLPKADLMNRVNSYTELKENVGRRINVLITRIN
EETNDLILSEKEAWQMLNLQEGVLVEGTVKKLFPFGAQIRIGETNRSGLLHISNVTRGEI
TSINNLLAVDEKVKVMVVKSMFPDKISLSIAELESEPGLFLKDKEKVFSEAKEMAKKYRQ
NLRTVSATRKPEPLPTDRLPFEDEESLYANWKWFEFERDIV

Transcript Sequence

Gene sequence data has not been registered.